PEER-REVIEWED PUBLICATIONS
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Clinical Futures investigators are international experts in their clinical research related fields and have authored hundreds of pediatric research articles in leading peer-reviewed journals. From here, you can access Clinical Futures journal article abstracts by author, title, or year.
2026
Distribution of capsule and O types in Klebsiella pneumoniae causing neonatal sepsis in Africa and South Asia: A meta-analysis of genome-predicted serotype prevalence to inform potential vaccine coverage
PLoS medicine, 2026
Thomas Stanton, Shaun Keegan, Jabir Abdulahi, Anne Amulele V, Matthew Bates, Eva Heinz, Yogesh Hooda, Weiming Hu, Kajal Jain, Samiah Kanwar, Rindidzani Magobo, Courtney Olwagen, John Tembo, Tolbert Sonda, Jonathan Strysko, Caroline Tigoi, Sameen Amin, Kyle Bittinger, Jennifer Cornick, Ebenezer Foster-Nyarko, Wilson Gumbi, Aneeta Hotwani, Naveed Iqbal, Steven Jones, Furqan Kabir, Waqasuddin Khan, Chileshe Musyani, Carolyn McGann, Varsha Mittal, Ahmed Moustafa, Patrick Musicha, James Mwansa, Moreka Ndumba, Erkison Odih, Donwilliams Omuoyo, Oliver Pearse, Laura Phillips, Paul Planet, Aniqa Rasool, Charlene Rodrigues, Kirsty Sands, Arif Tanmoy, Erin Theiller, Allan Zuza, Sulagna Basu, Grace Chan, Kenneth Iregbu, Jean-Baptiste Mazarati, Semaria Alemayehu, Timothy Walsh, Rabaab Zahra, Angela Dramowski, Sombo Fwoloshi, Appiah-Korang Labi, Lola Madrid, Noah Obeng-Nkrumah, David Ojok, Boaz Wadugu, Andrew Whitelaw, Adhisivam Bethou, Anudita Bhargava, Atul Jindal, Ruchi Nanavati, Priyanka Prasad, Apurba Sastry, Joveria Farooqi, Najia Ghanchi, Fyezah Jehan, Erum Khan, Ramesh Agarwal, Alexander Aiken, James Berkley, Susan Coffin, Nicholas Feasey, Nelesh Govender, Davidson Hamer, Shabir Madhi, Muhammad Nisar, Samir Saha, Senjuti Saha, Mari Sankar, Kelly Wyres, Kathryn Holt
PLoS medicine, 2026
Thomas Stanton, Shaun Keegan, Jabir Abdulahi, Anne Amulele V, Matthew Bates, Eva Heinz, Yogesh Hooda, Weiming Hu, Kajal Jain, Samiah Kanwar, Rindidzani Magobo, Courtney Olwagen, John Tembo, Tolbert Sonda, Jonathan Strysko, Caroline Tigoi, Sameen Amin, Kyle Bittinger, Jennifer Cornick, Ebenezer Foster-Nyarko, Wilson Gumbi, Aneeta Hotwani, Naveed Iqbal, Steven Jones, Furqan Kabir, Waqasuddin Khan, Chileshe Musyani, Carolyn McGann, Varsha Mittal, Ahmed Moustafa, Patrick Musicha, James Mwansa, Moreka Ndumba, Erkison Odih, Donwilliams Omuoyo, Oliver Pearse, Laura Phillips, Paul Planet, Aniqa Rasool, Charlene Rodrigues, Kirsty Sands, Arif Tanmoy, Erin Theiller, Allan Zuza, Sulagna Basu, Grace Chan, Kenneth Iregbu, Jean-Baptiste Mazarati, Semaria Alemayehu, Timothy Walsh, Rabaab Zahra, Angela Dramowski, Sombo Fwoloshi, Appiah-Korang Labi, Lola Madrid, Noah Obeng-Nkrumah, David Ojok, Boaz Wadugu, Andrew Whitelaw, Adhisivam Bethou, Anudita Bhargava, Atul Jindal, Ruchi Nanavati, Priyanka Prasad, Apurba Sastry, Joveria Farooqi, Najia Ghanchi, Fyezah Jehan, Erum Khan, Ramesh Agarwal, Alexander Aiken, James Berkley, Susan Coffin, Nicholas Feasey, Nelesh Govender, Davidson Hamer, Shabir Madhi, Muhammad Nisar, Samir Saha, Senjuti Saha, Mari Sankar, Kelly Wyres, Kathryn Holt
Rapid dissemination of Staphylococcus aureus in the neonatal intensive care unit is associated with invasive infection
Nature communications, 2026
Qianxuan She, Lakshmi Srinivasan, Erin Theiller, Bianca Galis, T'Nia Napper, Andries Feder, Alex Arvanitis, Steven Jones, Ericka Hayes, Karen Puopolo, Robert Baldassano, Michael David, Susan Coffin, Kathleen Gibbs, Robert Potter, Kenneth Smith, Rebecca Harris, Joseph Zackular, Ahmed Moustafa, Paul Planet
Nature communications, 2026
Qianxuan She, Lakshmi Srinivasan, Erin Theiller, Bianca Galis, T'Nia Napper, Andries Feder, Alex Arvanitis, Steven Jones, Ericka Hayes, Karen Puopolo, Robert Baldassano, Michael David, Susan Coffin, Kathleen Gibbs, Robert Potter, Kenneth Smith, Rebecca Harris, Joseph Zackular, Ahmed Moustafa, Paul Planet
Empowering global disease surveillance with CURED: a tool for rapid identification of unique genomic biomarkers
mSystems, 2026
Erin Theiller, Swetha Rajagopol, Stephanie Higgins, Dayanara Torres, T'Nia Napper, Bianca Galis, Arie Dash, Elizabeth Qian, Lauren Hamlette, Qianxuan She, Ceylan Tanes, Nathan L'Etoile, Andries Feder, Alice Viana, Matheus Esteves, Michael Abt, Susan Coffin, Ericka Hayes, Robert Potter, Joseph Zackular, Lakshmi Srinivasan, Agnes Figueiredo, Paul Planet, Ahmed Moustafa
mSystems, 2026
Erin Theiller, Swetha Rajagopol, Stephanie Higgins, Dayanara Torres, T'Nia Napper, Bianca Galis, Arie Dash, Elizabeth Qian, Lauren Hamlette, Qianxuan She, Ceylan Tanes, Nathan L'Etoile, Andries Feder, Alice Viana, Matheus Esteves, Michael Abt, Susan Coffin, Ericka Hayes, Robert Potter, Joseph Zackular, Lakshmi Srinivasan, Agnes Figueiredo, Paul Planet, Ahmed Moustafa
Contribution of nosocomial transmission to Klebsiella pneumoniae neonatal sepsis in Africa and South Asia: An observational study of infection clusters inferred from pathogen genomics and temporal data
PLoS medicine, 2026
Erkison Odih, Jabir Abdulahi, Anne Amulele V, Matthew Bates, Eva Heinz, Weiming Hu, Kajal Jain, Rindidzani Magobo, Courtney Olwagen, John Tembo, Tolbert Sonda, Jonathan Strysko, Caroline Tigoi, Kyle Bittinger, Jennifer Cornick, Ebenezer Foster-Nyarko, Wilson Gumbi, Steven Jones, Chileshe Musyani, Carolyn McGann, Ahmed Moustafa, Patrick Musicha, James Mwansa, Moreka Ndumba, Thomas Stanton, Donwilliams Omuoyo, Oliver Pearse, Laura Phillips, Paul Planet, Charlene Rodrigues, Fatou Secka, Kirsty Sands, Erin Theiller, Allan Zuza, Sulagna Basu, Grace Chan, Kenneth Iregbu, Jean-Baptiste Mazarati, Semaria Alemayehu, Timothy Walsh, Rabaab Zahra, Angela Dramowski, Sombo Fwoloshi, Appiah-Korang Labi, Lola Madrid, Noah Obeng-Nkrumah, David Ojok, Boaz Wadugu, Andrew Whitelaw, Anudita Bhargava, Atul Jindal, Ramesh Agarwal, Alexander Aiken, James Berkley, Susan Coffin, Nicholas Feasey, Nelesh Govender, Davidson Hamer, Shabir Madhi, Mari Sankar, Kelly Wyres, Kathryn Holt
PLoS medicine, 2026
Erkison Odih, Jabir Abdulahi, Anne Amulele V, Matthew Bates, Eva Heinz, Weiming Hu, Kajal Jain, Rindidzani Magobo, Courtney Olwagen, John Tembo, Tolbert Sonda, Jonathan Strysko, Caroline Tigoi, Kyle Bittinger, Jennifer Cornick, Ebenezer Foster-Nyarko, Wilson Gumbi, Steven Jones, Chileshe Musyani, Carolyn McGann, Ahmed Moustafa, Patrick Musicha, James Mwansa, Moreka Ndumba, Thomas Stanton, Donwilliams Omuoyo, Oliver Pearse, Laura Phillips, Paul Planet, Charlene Rodrigues, Fatou Secka, Kirsty Sands, Erin Theiller, Allan Zuza, Sulagna Basu, Grace Chan, Kenneth Iregbu, Jean-Baptiste Mazarati, Semaria Alemayehu, Timothy Walsh, Rabaab Zahra, Angela Dramowski, Sombo Fwoloshi, Appiah-Korang Labi, Lola Madrid, Noah Obeng-Nkrumah, David Ojok, Boaz Wadugu, Andrew Whitelaw, Anudita Bhargava, Atul Jindal, Ramesh Agarwal, Alexander Aiken, James Berkley, Susan Coffin, Nicholas Feasey, Nelesh Govender, Davidson Hamer, Shabir Madhi, Mari Sankar, Kelly Wyres, Kathryn Holt
2025
Effect of maternal HIV status on the early neonatal microbiome
Journal of the Pediatric Infectious Diseases Society, 2025
M Carolyn, Jonathan Strysko, One Bayani, Banno Moorad, Nametso Ntlhako, Ngwao Nwako, Weiming Hu, Ceylan Tanes, Ahmed Moustafa, Steven Jones, Britt Nakstad, Alemayehu Gezmu, Tonya Arscott-Mills, David Goldfarb, Andrew Steenhoff, Melissa Richard-Greenblatt, Tichaona Machiya, Tefelo Thela, Margaret Mokomane, Giacomo Paganotti, Moses Vurayai, Morgan Zalot, Mickael Boustany, Paul Planet, Susan Coffin, Kyle Bittinger
Journal of the Pediatric Infectious Diseases Society, 2025
M Carolyn, Jonathan Strysko, One Bayani, Banno Moorad, Nametso Ntlhako, Ngwao Nwako, Weiming Hu, Ceylan Tanes, Ahmed Moustafa, Steven Jones, Britt Nakstad, Alemayehu Gezmu, Tonya Arscott-Mills, David Goldfarb, Andrew Steenhoff, Melissa Richard-Greenblatt, Tichaona Machiya, Tefelo Thela, Margaret Mokomane, Giacomo Paganotti, Moses Vurayai, Morgan Zalot, Mickael Boustany, Paul Planet, Susan Coffin, Kyle Bittinger
2022
SARS-CoV-2 Variants Associated with Vaccine Breakthrough in the Delaware Valley through Summer 2021
mBio, 2022
Andrew Marques, Scott Sherrill-Mix, John Everett, Shantan Reddy, Pascha Hokama, Aoife Roche, Young Hwang, Abigail Glascock, Samantha Whiteside, Jevon Graham-Wooten, Layla Khatib, Ayannah Fitzgerald, Ahmed Moustafa, Colleen Bianco, Swetha Rajagopal, Jenna Helton, Regan Deming, Lidiya Denu, Azad Ahmed, Eimear Kitt, Susan Coffin, Claire Newbern, Josh Mell, Paul Planet, Nitika Badjatia, Bonnie Richards, Zi-Xuan Wang, Carolyn Cannuscio, Katherine Strelau, Anne Jaskowiak-Barr, Leigh Cressman, Sean Loughrey, Arupa Ganguly, Michael Feldman, Ronald Collman, Kyle Rodino, Brendan Kelly, Frederic Bushman
mBio, 2022
Andrew Marques, Scott Sherrill-Mix, John Everett, Shantan Reddy, Pascha Hokama, Aoife Roche, Young Hwang, Abigail Glascock, Samantha Whiteside, Jevon Graham-Wooten, Layla Khatib, Ayannah Fitzgerald, Ahmed Moustafa, Colleen Bianco, Swetha Rajagopal, Jenna Helton, Regan Deming, Lidiya Denu, Azad Ahmed, Eimear Kitt, Susan Coffin, Claire Newbern, Josh Mell, Paul Planet, Nitika Badjatia, Bonnie Richards, Zi-Xuan Wang, Carolyn Cannuscio, Katherine Strelau, Anne Jaskowiak-Barr, Leigh Cressman, Sean Loughrey, Arupa Ganguly, Michael Feldman, Ronald Collman, Kyle Rodino, Brendan Kelly, Frederic Bushman
2021
Comparative Analysis of Emerging B.1.1.7+E484K SARS-CoV-2 Isolates
Open Forum Infect Dis, 2021
Ahmed Moustafa, Colleen Bianco, Lidiya Denu, Azad Ahmed, Susan Coffin, Brandy Neide, John Everett, Shantan Reddy, Emilie Rabut, Jasmine Deseignora, Michael Feldman, Kyle Rodino, Frederic Bushman, Rebecca Harris, Josh Mell, Paul Planet
Open Forum Infect Dis, 2021
Ahmed Moustafa, Colleen Bianco, Lidiya Denu, Azad Ahmed, Susan Coffin, Brandy Neide, John Everett, Shantan Reddy, Emilie Rabut, Jasmine Deseignora, Michael Feldman, Kyle Rodino, Frederic Bushman, Rebecca Harris, Josh Mell, Paul Planet
Multidrug-Resistant Methicillin-Resistant Staphylococcus aureus Associated with Bacteremia and Monocyte Evasion, Rio de Janeiro, Brazil
Emerg Infect Dis, 2021
Alice Viana, Ana Botelho, Ahmed Moustafa, Craig Boge, Adriana Ferreira, Maria Carvalho, Márcia Guimarães, Bruno Costa, Marcos de Mattos, Sabrina Maciel, Juliana Echevarria-Lima, Apurva Narechania, Kelsey O'Brien, Chanelle Ryan, Jeffrey Gerber, Bernadete Carvalho, Agnes Figueiredo, Paul Planet
Emerg Infect Dis, 2021
Alice Viana, Ana Botelho, Ahmed Moustafa, Craig Boge, Adriana Ferreira, Maria Carvalho, Márcia Guimarães, Bruno Costa, Marcos de Mattos, Sabrina Maciel, Juliana Echevarria-Lima, Apurva Narechania, Kelsey O'Brien, Chanelle Ryan, Jeffrey Gerber, Bernadete Carvalho, Agnes Figueiredo, Paul Planet


