First name
Di
Last name
Shu

Title

Patterns in the Development of Pediatric Allergy.

Year of Publication

2023

Date Published

08/2023

ISSN Number

1098-4275

Abstract

OBJECTIVES: Describe clinical and epidemiologic patterns of pediatric allergy using longitudinal electronic health records (EHRs) from a multistate consortium of US practices.

METHODS: Using the multistate Comparative Effectiveness Research through Collaborative Electronic Reporting EHR database, we defined a cohort of 218 485 children (0-18 years) who were observed for ≥5 years between 1999 and 2020. Children with atopic dermatitis (AD), immunoglobulin E-mediated food allergy (IgE-FA), asthma, allergic rhinitis (AR), and eosinophilic esophagitis (EoE) were identified using a combination of diagnosis codes and medication prescriptions. We determined age at diagnosis, cumulative incidence, and allergic comorbidity.

RESULTS: Allergic disease cumulative (and peak age of) incidence was 10.3% (4 months) for AD, 4.0% (13 months) for IgE-FA, 20.1% (13 months) for asthma, 19.7% (26 months) for AR, and 0.11% (35 months) for EoE. The most diagnosed IgE-FAs were peanut (1.9%), egg (0.8%), and shellfish (0.6%). A total of 13.4% of children had ≥2 allergic conditions, and respiratory allergies (ie, asthma, AR) were commonly comorbid with each other, and with other allergic conditions.

CONCLUSIONS: We detail pediatric allergy patterns using longitudinal, health care provider-based data from EHR systems across multiple US states and varied pediatric practice types. Our results support the population-level allergic march progression and indicate high rates of comorbidity among children with food and respiratory allergies.

DOI

10.1542/peds.2022-060531

Alternate Title

Pediatrics

PMID

37489286
Featured Publication
No

Title

Trends and Persistent Disparities in Child Obesity During the COVID-19 Pandemic.

Year of Publication

2023

Date Published

05/2023

ISSN Number

2153-2176

Abstract

The COVID-19 pandemic has been associated with increases in pediatric obesity and widening pre-existing disparities. To better understand the pandemic's long-term impacts, we evaluated trends in obesity across different demographic groups during the pandemic through December 2022. Using a retrospective cohort design, we analyzed electronic health record data from a large pediatric primary care network. Logistic regression models fit using generalized estimating equations estimated odds ratios (ORs) for changes in the level and trajectory of obesity across 2-year month-matched periods: prepandemic (June 2017 to December 2019) and pandemic (June 2020 to December 2022). Among a cohort of 153,667 patients with visits in each period, there was a significant increase in the level of obesity at the pandemic onset [OR: 1.229, 95% confidence interval (CI): 1.211-1.247] followed by a significant decrease in the trend for obesity (OR: 0.993, 95% CI: 0.992-0.993). By December 2022, obesity had returned to prepandemic levels. However, persistent sociodemographic disparities remain.

DOI

10.1089/chi.2022.0205

Alternate Title

Child Obes

PMID

37222743
Featured Publication
No

Title

Revisiting sample size planning for receiver operating characteristic studies: A confidence interval approach with precision and assurance.

Year of Publication

2023

Number of Pages

9622802231151210

Date Published

02/2023

ISSN Number

1477-0334

Abstract

Estimation of areas under receiver operating characteristic curves and their differences is a key task in diagnostic studies. Here we develop closed-form sample size formulas for such studies with a focus on estimation rather than hypothesis testing, by explicitly incorporating pre-specified precision and assurance, with precision denoted by the lower limit of confidence interval and assurance denoted by the probability of achieving that lower limit. For sample size estimation purposes, we introduce a normality-based variance function for valid estimation allowing for unequal variances of observations in the disease and non-disease groups. Simulation results demonstrate that the proposed formulas produce empirical assurance probability close to the pre-specified assurance probability and empirical coverage probability close to the nominal level. Compared with a frequently used existing variance function, the proposed function provides more accurate and efficient sample size estimates. For an illustration of the proposed formulas, we present real-world worked examples. To facilitate implementation, we have developed an online calculator openly available at https://dishu.page/calculator/.

DOI

10.1177/09622802231151210

Alternate Title

Stat Methods Med Res

PMID

36727203

Title

A rank-based approach to design and analysis of pretest-posttest randomized trials, with application to COVID-19 ordinal scale data.

Year of Publication

2023

Number of Pages

107085

Date Published

01/2023

ISSN Number

1559-2030

Abstract

Randomized controlled trials with a pretest-posttest design frequently yield ordered categorical outcome data. Focusing on the estimation of the win probability that a treated participant would have a better score than (or win over) a control participant, we developed methods for analysis and sample size planning for such trials. We exploited the analysis of covariance framework with the dependent variable being individual participants' win fractions at posttest and the covariate being the win fractions at pretest. The win fractions were obtained using the mid-ranks of the ordinal data. Simulation evaluation based on a recent randomized trial on COVID-19 suggests that the methods perform very well. A sample SAS code for data analysis is presented.

DOI

10.1016/j.cct.2023.107085

Alternate Title

Contemp Clin Trials

PMID

36657521

Title

Robust causal inference of drug-drug interactions.

Year of Publication

2023

Date Published

01/2023

ISSN Number

1097-0258

Abstract

There is growing interest in developing causal inference methods for multi-valued treatments with a focus on pairwise average treatment effects. Here we focus on a clinically important, yet less-studied estimand: causal drug-drug interactions (DDIs), which quantifies the degree to which the causal effect of drug A is altered by the presence versus the absence of drug B. Confounding adjustment when studying the effects of DDIs can be accomplished via inverse probability of treatment weighting (IPTW), a standard approach originally developed for binary treatments and later generalized to multi-valued treatments. However, this approach generally results in biased results when the propensity score model is misspecified. Motivated by the need for more robust techniques, we propose two empirical likelihood-based weighting approaches that allow for specifying a set of propensity score models, with the second method balancing user-specified covariates directly, by incorporating additional, nonparametric constraints. The resulting estimators from both methods are consistent when the postulated set of propensity score models contains a correct one; this property has been termed multiple robustness. In this paper, we derive two multiply-robust estimators of the causal DDI, and develop inference procedures. We then evaluate their finite sample performance through simulation. The results demonstrate that the proposed estimators outperform the standard IPTW method in terms of both robustness and efficiency. Finally, we apply the proposed methods to evaluate the impact of renin-angiotensin system inhibitors (RAS-I) on the comparative nephrotoxicity of nonsteroidal anti-inflammatory drugs (NSAID) and opioids, using data derived from electronic medical records from a large multi-hospital health system.

DOI

10.1002/sim.9653

Alternate Title

Stat Med

PMID

36627826

Title

Autism Spectrum Disorder Screening During the COVID-19 Pandemic in a Large Primary Care Network.

Year of Publication

2022

Number of Pages

1384-1389

Date Published

12/2022

ISSN Number

1876-2867

Abstract

OBJECTIVE: To assess the impact of the COVID-19 pandemic on screening for autism spectrum disorder (ASD) and screening equity among eligible children presenting for well-child care in a large primary care pediatric network, we compared rates of ASD screening completion and positivity during the pandemic to the year prior, stratified by sociodemographic factors.

METHODS: Patients who presented for in-person well-child care at 16 to 26 months between March 1, 2020 and February 28, 2021 (COVID-19 cohort, n = 24,549) were compared to those who presented between March 1, 2019 and February 29, 2020 (pre-COVID-19 cohort, n = 26,779). Demographics and rates of completion and positivity of the Modified Checklist for Autism in Toddlers with Follow-up (M-CHAT/F) were calculated from the electronic health record and compared by cohort using logistic regression models.

RESULTS: Total eligible visits decreased by 8.3% between cohorts, with a greater decline in Black and publicly insured children. In the pre-COVID-19 cohort, 89.0% of eligible children were screened at least once, compared to 86.4% during the pandemic (P < 0.001). Significant declines in screening completion were observed across all sociodemographic groups except among Asian children, with the sharpest declines among non-Hispanic White children. Sociodemographic differences were not observed in screen-positive rates by cohort.

CONCLUSIONS: Well-child visits and ASD screenings declined across groups, but with different patterns by race and ethnicity during the COVID-19 pandemic. Findings regarding screen-completion rates should not be interpreted as a decline in screening disparities, given differences in who presented for care. Strategies for catch-up screening for all children should be considered.

DOI

10.1016/j.acap.2022.04.005

Alternate Title

Acad Pediatr

PMID

35460894

Title

Meta-analysis with sample-standardization in multi-site studies.

Year of Publication

2022

Date Published

08/2022

ISSN Number

1099-1557

Abstract

PURPOSE: To conceptualize a particular target population and estimand for multi-site pharmacoepidemiologic studies within data networks and to analytically examine sample-standardization as a meta-analytic method compared with inverse-variance weighted meta-analyses.

METHODS: The target population of interest is all and only all individuals from the data-contributing sites. Standardization, a general conditioning technique frequently employed for confounding control, was adopted to estimate the network-wide causal treatment effect. Specifically, the proposed sample-standardization yields a meta-analysis estimator, that is, a weighted summation of site-specific results, where the weight for a site is the proportion of its size in the entire network. This sample-standardization estimator was evaluated analytically in comparison to estimators from inverse-variance weighted fixed-effect and random-effects meta-analyses in terms of statistical consistency.

RESULTS: A proof is reported to justify the consistency of the sample-standardization estimator with and without treatment effect heterogeneity by site. Both inverse-variance weighted fixed-effect and random-effects meta-analyses were found to generally result in inconsistent estimators in the presence of treatment effect heterogeneity by site for this particular target population and estimand.

CONCLUSIONS: Sample-standardization is a valid approach to generate causal inference in multi-site studies when the target population comprises all and only all individuals within the network, even in the presence of heterogeneity of treatment effect by site. Multi-site studies should clearly specify the target population and estimand to help select the most appropriate meta-analytic methods.

DOI

10.1002/pds.5527

Alternate Title

Pharmacoepidemiol Drug Saf

PMID

35976190

Title

Autism Spectrum Disorder Screening during the COVID-19 Pandemic in a Large Primary Care Network.

Year of Publication

2022

Date Published

2022 Apr 20

ISSN Number

1876-2867

Abstract

<p><strong>OBJECTIVE: </strong>To assess the impact of the COVID-19 pandemic on screening for autism spectrum disorder (ASD) and screening equity among eligible children presenting for well-child care in a large primary care pediatric network, we compared rates of ASD screening completion and positivity during the pandemic to the year prior, stratified by socio-demographic factors.</p>

<p><strong>METHODS: </strong>Patients who presented for in-person well-child care at 16-26 months between 3/1/2020 and 2/28/2021 (COVID-19 cohort, n=24,549) were compared to those who presented between 3/1/2019 and 2/29/2020 (pre-COVID-19 cohort, n= 26,779). Demographics and rates of completion and positivity of the Modified Checklist for Autism in Toddlers with Follow-up (M-CHAT/F) were calculated from the electronic health record (EHR) and compared by cohort using logistic regression models.</p>

<p><strong>RESULTS: </strong>Total eligible visits decreased by 8.3% between cohorts, with a greater decline in Black and publicly insured children. In the pre-COVID-19 cohort, 89.0% of eligible children were screened at least once, compared to 86.4% during the pandemic (p&lt;0.001). Significant declines in screening completion were observed across all socio-demographic groups except among Asian children, with the sharpest declines among non-Hispanic White children. Socio-demographic differences were not observed in screen-positive rates by cohort.</p>

<p><strong>CONCLUSIONS: </strong>Well-child visits and ASD screenings declined across groups, but with different patterns by race and ethnicity during the COVID-19 pandemic. Findings regarding screen-completion rates should not be interpreted as a decline in screening disparities, given differences in who presented for care. Strategies for catch-up screening for all children should be considered.</p>

DOI

10.1016/j.acap.2022.04.005

Alternate Title

Acad Pediatr

PMID

35460894

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